Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899303.1_cds_XP_016449272.1_43841
CDS Infomation

[gene=LOC107774291] [db_xref=GeneID:107774291] [protein=LRR receptor-like serine/threonine-protein kinase HSL2] [protein_id=XP_016449272.1] [location=join(5235..7815,9329..9714)] [gbkey=CDS]
Sequence

ATGGAACACACGAAACTCCAATTTCTGCTACTCATACAACTGTTTCTATTCATTATTCCG
GCTAGTTGCTTGAACCGCGATATCGCCATTTTACTCCGGGTTAAGACAGGTCAGCTCGGT
GACCCCAATGGATTGCTCTCTGATTGGAACGCGTCTGCTCCAAATGCGCCTTGTAACTGG
ACCGGCATTACCTGTGATCGTAAAACGCATAAGGTTGTCTCCATCGAGTTCACCAGTTTT
GGAATCTCAGGTCATTTTCCGGCCGACTTCTGCCGGATTTCGACTTTGCAGAAACTCAAT
CTGGGCGATAACAGTTTCGGTGACTCTATTTCCTCTGACTCCTGGTCCCTATGTTCGCAT
CTGCACTTTTTGAATCTTTCTTTAAATTTCTTCGTTGGCAAGCTGCCGGAGTTTATAGCC
AAGTTTGATAACTTGACCGTGCTTGATGTTAATTCAAACAATTTCTCCGGTGATATTCCG
GCGAGCTTAGGCCGGTTACCGAGATTACAAGAGCTCGATATTGCCAACAATCTCCTTAAT
GGTTCAGTTCCTGAGTTCTTATCCAATCTCACCGAGTTGACTCGATTGGTCATTGCTCAA
AATCCATTTAAGCCAAGTCCATTGCCTTCCTCAATTGGACGACTAGGTAAACTTCGAATT
CTATATGCTCGGTTTGCGAATCTTATTGGAAATATTCCAGATTCCATTAAAGACCTGAAA
TCTATTCAGAATTTTGACGTGGCGATTAACAATCTAACTGGAAAAATTCCAGAAAGCATT
GGAGAGCTGAAAACCGTAGAACAAATAGAGCTCTTTCAGAATAAATTTTCAGGTGAACTG
CCGAACACGTTTTCGGGACTTGTTTCTCTGTTCAGGTTTGACGCTTCTCAGAATAATCTC
ACCGGAAAAATACCTGATAGCCTTGCCCGTTTGCCGCTGGTATCTTTGAATCTCAATGAT
AACAATTTAGAAGGCGAAATTCCAGAAAGTTTAGCTCTTAACCCGAATCTTACTCAGTTC
AAGCTCTTTAACAACAAATTTTCAGGTACTTTACCTCAAGATTTTGGTATGAGTTCAGAT
TTGGATGAGTTTGATGTCTCTGGCAATAATCTCGAAGGTTCTTTGCCCCCCAATTTATGT
TCCAGAAAGAAACTTAGGATTTTGAACCTGTTCGATAATAGGTTCAGTGGTTCAGTCCCT
GAATCCTATGGGGAGTGTAATTCACTAACGTACGTGCGTATCTATAACAACCAATTCTCT
GGTGAATTACCAACTGGTTTCTGGAGTTTTGCTGGATACACATTTCTTGAACTGAGAAAC
AACAACTTTCAAGGTTCAATTCCAGCTTCAATCTCCAATGCTCGTGGCCTAACAGAAATT
CTCATCTCCGGTAACAAATTCTCCGAGGAATTGCCGGCGGGATTATGCAATTTGGAAGAG
ATTGTGATTATGGACATAAGCAAGAATCAATTATCAGGAGATTTGCCTTCATGTATCACA
AAGATGAAAACGTTACAAAAGCTTGATCTTTCAGAAAATAGGATCACGGGTCAAATTCCC
AAATTAGTTAGTTCTTGGACCGACTTGACTGAACTGAATTTAGCTAACAATCAATTGACA
GGTGAAATTCCAGGTGAGCTTGGGACTTTGCCGGTTTTGACGTACTTAGACCTCGCTGGA
AACTCGCTTTCCGGCGAAATTCCGTCGGAGCTGAGCAACCTCAAGCTTAACAAGTTCAAC
GTATCAAATAACAGGCTTGAAGGAAAAGTGCCACTTGTGTTTGATAATGATTTTTTCATC
TCGGGTTTGCAGGGCAATCCGGATCTTTGTAGTCCGGATCTTAAACCTCTACCTCAGTGC
CCAAGACCCAAAAGTATTAGCTTGTATTTGGTGTGTATTTTATCAGCTTTATCCGTCATA
CTTGTCGGGTCACTTGTTTGGGTCTTGATCAAGGCCAAAAAGTTGCTACCCATTCGGAGT
AAGCGTAAAAGTGCATGGAGAATTACTGCATTTCAACGGGTTGGATTCACGGAGGGAGAC
TTGTTAGCTTCACTGACAAATGAGAATCTCATTGGAGCTGGTGGGTCTGGTCGGGTATAT
AGGGTCAAACTAAAAAACGGGCAGATGGTCGCGGTTAAGAAGCTTTGGGAGGCTAAACGG
GAGAGAGAATCTGAGGAGGTTTTCAGGTCGGAGGTGGAGACTCTAGGGAGAGTCCGACAT
GGAAACATAGTAAAACTATTGTACAGTGGCATTGGTGACCACTTCAGGATATTGGTGTAT
GAGTACATGGAAAATGGGAGCTTAGGAGATGTATTACATGGGGAAAAAGGTGGCATTCTT
TTGGATTGGCCAAGGAGATTTGGCATAGCAGTTGGAGCAGCTCAAGGATTGGCCTATTTG
CACCATGATTCTGTTCCTGCAATAGTGCACAGAGATGTCAAGTCTAATAACATTTTGTTG
GACGAGGATTTTAGGCCAAAAGTTGCTGATTTTGGGCTAGCTAAGGTAATGCAGCAGGAC
AGTGAGGAGAGTGATCAAGTCATGTCCCATATTGCTGGTTCCTACGGCTACATTGCACCT
GAATATGCGTATACTCTGAAGATTAATGAGAAGAGTGACGTTTATAGCTTTGGTGTGGTA
CTGTTGGAACTAATAACCGGTAAAAGGCCCAATGACTCCTCTTTCGGTGAGAACAAGGAC
ATGGTCAAGTGGGTGTTAGAGGTTGCAATATCGTCTAAAAAAGATGAAGGAAGTGGCCGT
GTCACGGGCAGCAATAGTATTCTTGATTTGAACCAGCTAGTCGACCAGAGAATGAATCCG
TCTGCAAGCAATTATGCAGAGATTAAAAAGGTTTTTGATGTGGCTTTGCTTTGCACTTCT
TCATTGCCCATTAACAGGCCGTCCATGAGAAGAGTTGTTGAATTGTTGAAGGATAACAGT
GTTGCTCGTTCTAAGTCAATCCGATAG

Peptide Sequence

PEP ID

XP_016449272.1
PEP Infomation

PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Nicotiana tabacum]
Sequence

MEHTKLQFLLLIQLFLFIIPASCLNRDIAILLRVKTGQLGDPNGLLSDWNASAPNAPCNW
TGITCDRKTHKVVSIEFTSFGISGHFPADFCRISTLQKLNLGDNSFGDSISSDSWSLCSH
LHFLNLSLNFFVGKLPEFIAKFDNLTVLDVNSNNFSGDIPASLGRLPRLQELDIANNLLN
GSVPEFLSNLTELTRLVIAQNPFKPSPLPSSIGRLGKLRILYARFANLIGNIPDSIKDLK
SIQNFDVAINNLTGKIPESIGELKTVEQIELFQNKFSGELPNTFSGLVSLFRFDASQNNL
TGKIPDSLARLPLVSLNLNDNNLEGEIPESLALNPNLTQFKLFNNKFSGTLPQDFGMSSD
LDEFDVSGNNLEGSLPPNLCSRKKLRILNLFDNRFSGSVPESYGECNSLTYVRIYNNQFS
GELPTGFWSFAGYTFLELRNNNFQGSIPASISNARGLTEILISGNKFSEELPAGLCNLEE
IVIMDISKNQLSGDLPSCITKMKTLQKLDLSENRITGQIPKLVSSWTDLTELNLANNQLT
GEIPGELGTLPVLTYLDLAGNSLSGEIPSELSNLKLNKFNVSNNRLEGKVPLVFDNDFFI
SGLQGNPDLCSPDLKPLPQCPRPKSISLYLVCILSALSVILVGSLVWVLIKAKKLLPIRS
KRKSAWRITAFQRVGFTEGDLLASLTNENLIGAGGSGRVYRVKLKNGQMVAVKKLWEAKR
ERESEEVFRSEVETLGRVRHGNIVKLLYSGIGDHFRILVYEYMENGSLGDVLHGEKGGIL
LDWPRRFGIAVGAAQGLAYLHHDSVPAIVHRDVKSNNILLDEDFRPKVADFGLAKVMQQD
SEESDQVMSHIAGSYGYIAPEYAYTLKINEKSDVYSFGVVLLELITGKRPNDSSFGENKD
MVKWVLEVAISSKKDEGSGRVTGSNSILDLNQLVDQRMNPSASNYAEIKKVFDVALLCTS
SLPINRPSMRRVVELLKDNSVARSKSIR

Transcript Sequence

Gene sequence data has not been registered.